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math/test/test_inverse_gaussian.cpp
Matt Borland e9cd6c96fd Add GPU support to normal dist 
Add SYCL testing of normal dist

Add CUDA testing of normal dist

Add NVRTC testing of normal dist

NVRTC fixes

Move headers for NVRTC support

Add GPU support to inverse gaussian dist

Add NVRTC testing of inverse Gaussian dist

Add CUDA testing of inverse gaussian dist

Add SYCL testing of inverse gaussian dist

Add GPU support to lognormal dist

Add SYCL testing of lognormal dist

Add CUDA testing of lognormal dist

Add nvrtc testing of lognormal dist

Add GPU support to negative binomial dist

Avoid float_prior on GPU platform

Add NVRTC testing of negative binomial dist

Fix ambiguous use of nextafter

Add CUDA testing of negative binomial dist

Fix float_prior workaround

Add SYCL testing of negative binomial dist

Add GPU support to non_central_beta dist

Add SYCL testing of nc beta dist

Add CUDA testing of nc beta dist

Enable generic dist handling on GPU

Add GPU support to brent_find_minima

Add NVRTC testing of nc beta dist

Add utility header

Replace non-functional macro with new function

Add GPU support to non central chi squared dist

Add SYCL testing of non central chi squared dist

Add missing macro definition

Markup generic quantile finder

Add CUDA testing of non central chi squared dist

Add NVRTC testing of non central chi squared dist

Add GPU support to the non-central f dist

Add SYCL testing of ncf

Add CUDA testing of ncf dist

Add NVRTC testing of ncf dist

Add GPU support to students_t dist

Add SYCL testing of students_t dist

Add CUDA testing of students_t

Add NVRTC testing of students_t dist

Workaround for header cycle

Add GPU support to pareto dist

Add SYCL testing of pareto dist

Add CUDA testing of pareto dist

Add NVRTC testing of pareto dist

Add missing header

Add GPU support to poisson dist

Add SYCL testing of poisson dist

Add CUDA testing of poisson dist

Add NVRTC testing of poisson dist

Add forward decl for NVRTC platform

Add GPU support to rayleigh dist

Add CUDA testing of rayleigh dist

Add SYCL testing of rayleigh dist

Add NVRTC testing of rayleigh dist

Add GPU support to triangular dist

Add SYCL testing of triangular dist

Add NVRTC testing of triangular dist

Add CUDA testing of triangular dist

Add GPU support to the uniform dist

Add CUDA testing of uniform dist

Add SYCL testing of uniform dist

Add NVRTC testing of uniform dist

Fix missing header

Add markers to docs
2024-09-06 12:10:18 -04:00

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// Copyright Paul A. Bristow 2010.
// Copyright John Maddock 2010.
// Use, modification and distribution are subject to the
// Boost Software License, Version 1.0.
// (See accompanying file LICENSE_1_0.txt
// or copy at http://www.boost.org/LICENSE_1_0.txt)
#ifdef _MSC_VER
# pragma warning (disable : 4224) // nonstandard extension used : formal parameter 'type' was previously defined as a type
// in Boost.test and lexical_cast
# pragma warning (disable : 4310) // cast truncates constant value
# pragma warning (disable : 4512) // assignment operator could not be generated
#endif
//#include <pch.hpp> // include directory libs/math/src/tr1/ is needed.
#include <boost/math/tools/config.hpp>
#include "../include_private/boost/math/tools/test.hpp"
#ifndef BOOST_MATH_NO_REAL_CONCEPT_TESTS
#include <boost/math/concepts/real_concept.hpp> // for real_concept
#endif
#define BOOST_TEST_MAIN
#include <boost/test/unit_test.hpp> // Boost.Test
#include <boost/test/tools/floating_point_comparison.hpp>
#include <boost/math/distributions/inverse_gaussian.hpp>
using boost::math::inverse_gaussian_distribution;
using boost::math::inverse_gaussian;
#include "test_out_of_range.hpp"
#include <iostream>
#include <iomanip>
using std::cout;
using std::endl;
using std::setprecision;
#include <limits>
using std::numeric_limits;
#include <cmath>
using std::log;
template <class RealType>
void check_inverse_gaussian(RealType mean, RealType scale, RealType x, RealType p, RealType q, RealType tol)
{
using boost::math::inverse_gaussian_distribution;
BOOST_CHECK_CLOSE_FRACTION(
::boost::math::cdf( // Check cdf
inverse_gaussian_distribution<RealType>(mean, scale), // distribution.
x), // random variable.
p, // probability.
tol); // tolerance.
BOOST_CHECK_CLOSE_FRACTION(
::boost::math::cdf( // Check cdf complement
complement(
inverse_gaussian_distribution<RealType>(mean, scale), // distribution.
x)), // random variable.
q, // probability complement.
tol); // %tolerance.
BOOST_CHECK_CLOSE_FRACTION(
::boost::math::quantile( // Check quantile
inverse_gaussian_distribution<RealType>(mean, scale), // distribution.
p), // probability.
x, // random variable.
tol); // tolerance.
BOOST_CHECK_CLOSE_FRACTION(
::boost::math::quantile( // Check quantile complement
complement(
inverse_gaussian_distribution<RealType>(mean, scale), // distribution.
q)), // probability complement.
x, // random variable.
tol); // tolerance.
inverse_gaussian_distribution<RealType> dist (mean, scale);
if((p < 0.999) && (q < 0.999))
{ // We can only check this if P is not too close to 1,
// so that we can guarantee Q is accurate:
BOOST_CHECK_CLOSE_FRACTION(
cdf(complement(dist, x)), q, tol); // 1 - cdf
BOOST_CHECK_CLOSE_FRACTION(
quantile(dist, p), x, tol); // quantile(cdf) = x
BOOST_CHECK_CLOSE_FRACTION(
quantile(complement(dist, q)), x, tol); // quantile(complement(1 - cdf)) = x
}
}
template <class RealType>
void test_spots(RealType)
{
// Basic sanity checks
RealType tolerance = static_cast<RealType>(1e-4L); //
cout << "Tolerance for type " << typeid(RealType).name() << " is " << tolerance << endl;
// Check some bad parameters to the distribution,
#ifndef BOOST_NO_EXCEPTIONS
BOOST_MATH_CHECK_THROW(boost::math::inverse_gaussian_distribution<RealType> nbad1(0, 0), std::domain_error); // zero scale
BOOST_MATH_CHECK_THROW(boost::math::inverse_gaussian_distribution<RealType> nbad1(0, -1), std::domain_error); // negative scale
#else
BOOST_MATH_CHECK_THROW(boost::math::inverse_gaussian_distribution<RealType>(0, 0), std::domain_error); // zero scale
BOOST_MATH_CHECK_THROW(boost::math::inverse_gaussian_distribution<RealType>(0, -1), std::domain_error); // negative scale
#endif
inverse_gaussian_distribution<RealType> w11;
// Error tests:
check_out_of_range<inverse_gaussian_distribution<RealType> >(0.25, 1);
// Check complements.
BOOST_CHECK_CLOSE_FRACTION(
cdf(complement(w11, 1.)), static_cast<RealType>(1) - cdf(w11, 1.), tolerance); // cdf complement
// cdf(complement = 1 - cdf - but if cdf near unity, then loss of accuracy in cdf,
// but cdf complement is near zero but more accurate.
BOOST_CHECK_CLOSE_FRACTION( // quantile(complement p) == quantile(1 - p)
quantile(complement(w11, static_cast<RealType>(0.5))),
quantile(w11, 1 - static_cast<RealType>(0.5)),
tolerance); // cdf complement
check_inverse_gaussian(
static_cast<RealType>(2),
static_cast<RealType>(3),
static_cast<RealType>(1),
static_cast<RealType>(0.28738674440477374),
static_cast<RealType>(1 - 0.28738674440477374),
tolerance);
RealType tolfeweps = boost::math::tools::epsilon<RealType>() * 5;
inverse_gaussian_distribution<RealType> dist(2, 3);
using namespace std; // ADL of std names.
// mean:
BOOST_CHECK_CLOSE_FRACTION(mean(dist),
static_cast<RealType>(2), tolfeweps);
BOOST_CHECK_CLOSE_FRACTION(scale(dist),
static_cast<RealType>(3), tolfeweps);
// variance:
BOOST_CHECK_CLOSE_FRACTION(variance(dist),
static_cast<RealType>(2.6666666666666666666666666666666666666666666666666666666667L), 1000*tolfeweps);
// std deviation:
BOOST_CHECK_CLOSE_FRACTION(standard_deviation(dist),
static_cast<RealType>(1.632993L), 1000 * tolerance);
//// hazard:
//BOOST_CHECK_CLOSE_FRACTION(hazard(dist, x),
// pdf(dist, x) / cdf(complement(dist, x)), tolerance);
//// cumulative hazard:
//BOOST_CHECK_CLOSE_FRACTION(chf(dist, x),
// -log(cdf(complement(dist, x))), tolerance);
// coefficient_of_variation:
BOOST_CHECK_CLOSE_FRACTION(coefficient_of_variation(dist),
standard_deviation(dist) / mean(dist), tolerance);
// mode:
BOOST_CHECK_CLOSE_FRACTION(mode(dist),
static_cast<RealType>(0.8284271L), tolerance);
// median
BOOST_CHECK_CLOSE_FRACTION(median(dist),
static_cast<RealType>(1.5122506636053668L), tolerance);
// Fails for real_concept - because std::numeric_limits<RealType>::digits = 0
// skewness:
BOOST_CHECK_CLOSE_FRACTION(skewness(dist),
static_cast<RealType>(2.449490L), tolerance);
// kurtosis:
BOOST_CHECK_CLOSE_FRACTION(kurtosis(dist),
static_cast<RealType>(10-3), tolerance);
BOOST_CHECK_CLOSE_FRACTION(kurtosis_excess(dist),
static_cast<RealType>(10), tolerance);
} // template <class RealType>void test_spots(RealType)
BOOST_AUTO_TEST_CASE( test_main )
{
using boost::math::inverse_gaussian;
using boost::math::inverse_gaussian_distribution;
//int precision = 17; // std::numeric_limits<double::max_digits10;
double tolfeweps = numeric_limits<double>::epsilon() * 5;
//double tol6decdigits = numeric_limits<float>::epsilon() * 2;
// Check that can generate inverse_gaussian distribution using the two convenience methods:
boost::math::inverse_gaussian w12(1., 2); // Using typedef
inverse_gaussian_distribution<> w23(2., 3); // Using default RealType double.
boost::math::inverse_gaussian w11; // Use default unity values for mean and scale.
// Note NOT myn01() as the compiler will interpret as a function!
BOOST_CHECK_EQUAL(w11.mean(), 1);
BOOST_CHECK_EQUAL(w11.scale(), 1);
BOOST_CHECK_EQUAL(w23.mean(), 2);
BOOST_CHECK_EQUAL(w23.scale(), 3);
BOOST_CHECK_EQUAL(w23.shape(), 1.5L);
// Check the synonyms, provided to allow generic use of find_location and find_scale.
BOOST_CHECK_EQUAL(w11.mean(), w11.location());
BOOST_CHECK_EQUAL(w11.scale(), w11.scale());
BOOST_CHECK_CLOSE_FRACTION(mean(w11), static_cast<double>(1), tolfeweps); // Default mean == unity
BOOST_CHECK_CLOSE_FRACTION(scale(w11), static_cast<double>(1), tolfeweps); // Default mean == unity
// median
// (test double because fails for real_concept because numeric_limits<real_concept>::digits = 0)
BOOST_CHECK_CLOSE_FRACTION(median(w11),
static_cast<double>(0.67584130569523893), tolfeweps);
BOOST_CHECK_CLOSE_FRACTION(median(w23),
static_cast<double>(1.5122506636053668), tolfeweps);
// Initial spot tests using double values from R.
// library(SuppDists)
// formatC(SuppDists::dinverse_gaussian(1, 1, 1), digits=17) ...
BOOST_CHECK_CLOSE_FRACTION( // x = 1
pdf(w11, 1.), static_cast<double>(0.3989422804014327), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION( // x = 1
logpdf(w11, 1.), static_cast<double>(log(0.3989422804014327)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 1.), static_cast<double>(0.66810200122317065), 10 * tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
pdf(w11, 0.1), static_cast<double>(0.21979480031862672), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w11, 0.1), static_cast<double>(log(0.21979480031862672)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.1), static_cast<double>(0.0040761113207110162), 10 * tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION( // small x
pdf(w11, 0.01), static_cast<double>(2.0811768202028392e-19), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION( // small x
logpdf(w11, 0.01), static_cast<double>(log(2.0811768202028392e-19)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.01), static_cast<double>(4.122313403318778e-23), 10 * tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION( // smaller x
pdf(w11, 0.001), static_cast<double>(2.4420044378793562e-213), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION( // smaller x
logpdf(w11, 0.001), static_cast<double>(log(2.4420044378793562e-213)), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.001), static_cast<double>(4.8791443010851493e-219), 1000 * tolfeweps); // cdf
// 4.8791443010859224e-219 versus 4.8791443010851493e-219 so still 14 decimal digits.
BOOST_CHECK_CLOSE_FRACTION(
quantile(w11, 0.66810200122317065), static_cast<double>(1.), 1 * tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
quantile(w11, 0.0040761113207110162), static_cast<double>(0.1), 1 * tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
quantile(w11, 4.122313403318778e-23), 0.01, 1 * tolfeweps); // quantile
BOOST_CHECK_CLOSE_FRACTION(
quantile(w11, 2.4420044378793562e-213), 0.001, 0.03); // quantile
// quantile 0.001026926242348481 compared to expected 0.001, so much less accurate,
// but better than R that gives up completely!
// R Error in SuppDists::qinverse_gaussian(4.87914430108515e-219, 1, 1) : Infinite value in NewtonRoot()
BOOST_CHECK_CLOSE_FRACTION(
pdf(w11, 0.5), static_cast<double>(0.87878257893544476), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w11, 0.5), static_cast<double>(log(0.87878257893544476)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.5), static_cast<double>(0.3649755481729598), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
pdf(w11, 2), static_cast<double>(0.10984782236693059), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w11, 2), static_cast<double>(log(0.10984782236693059)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 2), static_cast<double>(.88547542598600637), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
pdf(w11, 10), static_cast<double>(0.00021979480031862676), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w11, 10), static_cast<double>(log(0.00021979480031862676)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 10), static_cast<double>(0.99964958546279115), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
pdf(w11, 100), static_cast<double>(2.0811768202028246e-25), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w11, 100), static_cast<double>(log(2.0811768202028246e-25)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 100), static_cast<double>(1), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
pdf(w11, 1000), static_cast<double>(2.4420044378793564e-222), 10 * tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w11, 1000), static_cast<double>(log(2.4420044378793564e-222)), 10 * tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 1000), static_cast<double>(1.), tolfeweps); // cdf
// A few more misc tests, probably not very useful.
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 1.), static_cast<double>(0.66810200122317065), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.1), static_cast<double>(0.0040761113207110162), tolfeweps * 5); // cdf
// 0.0040761113207110162 0.0040761113207110362
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.2), static_cast<double>(0.063753567519976254), tolfeweps * 5); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.5), static_cast<double>(0.3649755481729598), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.9), static_cast<double>(0.62502320258649202), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.99), static_cast<double>(0.66408247396139031), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 0.999), static_cast<double>(0.66770275955311675), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 10.), static_cast<double>(0.99964958546279115), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w11, 50.), static_cast<double>(0.99999999999992029), tolfeweps); // cdf
BOOST_CHECK_CLOSE_FRACTION(
quantile(w11, 0.3649755481729598), static_cast<double>(0.5), tolfeweps); // quantile
BOOST_CHECK_CLOSE_FRACTION(
quantile(w11, 0.62502320258649202), static_cast<double>(0.9), tolfeweps); // quantile
BOOST_CHECK_CLOSE_FRACTION(
quantile(w11, 0.0040761113207110162), static_cast<double>(0.1), tolfeweps); // quantile
// Wald(2,3) tests
// ===================
BOOST_CHECK_CLOSE_FRACTION( // formatC(SuppDists::dinvGauss(1, 2, 3), digits=17) "0.47490884963330904"
pdf(w23, 1.), static_cast<double>(0.47490884963330904), tolfeweps ); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w23, 1.), static_cast<double>(log(0.47490884963330904)), tolfeweps ); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
pdf(w23, 0.1), static_cast<double>(2.8854207087665401e-05), tolfeweps * 2); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w23, 0.1), static_cast<double>(log(2.8854207087665401e-05)), tolfeweps * 2); // logpdf
//2.8854207087665452e-005 2.8854207087665401e-005
BOOST_CHECK_CLOSE_FRACTION(
pdf(w23, 10.), static_cast<double>(0.0019822751498574636), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w23, 10.), static_cast<double>(log(0.0019822751498574636)), tolfeweps); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
pdf(w23, 10.), static_cast<double>(0.0019822751498574636), tolfeweps); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w23, 10.), static_cast<double>(log(0.0019822751498574636)), tolfeweps); // logpdf
// Bigger changes in mean and scale.
inverse_gaussian w012(0.1, 2);
BOOST_CHECK_CLOSE_FRACTION(
pdf(w012, 1.), static_cast<double>(3.7460367141230404e-36), tolfeweps ); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w012, 1.), static_cast<double>(log(3.7460367141230404e-36)), tolfeweps ); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w012, 1.), static_cast<double>(1), tolfeweps ); // pdf
inverse_gaussian w0110(0.1, 10);
BOOST_CHECK_CLOSE_FRACTION(
pdf(w0110, 1.), static_cast<double>(1.6279643678071011e-176), 100 * tolfeweps ); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w0110, 1.), static_cast<double>(log(1.6279643678071011e-176)), 100 * tolfeweps ); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w0110, 1.), static_cast<double>(1), tolfeweps ); // cdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(complement(w0110, 1.)), static_cast<double>(3.2787685715328683e-179), 1e6 * tolfeweps ); // cdf complement
// Differs because of loss of accuracy.
BOOST_CHECK_CLOSE_FRACTION(
pdf(w0110, 0.1), static_cast<double>(39.894228040143268), tolfeweps ); // pdf
BOOST_CHECK_CLOSE_FRACTION(
logpdf(w0110, 0.1), static_cast<double>(log(39.894228040143268)), tolfeweps ); // logpdf
BOOST_CHECK_CLOSE_FRACTION(
cdf(w0110, 0.1), static_cast<double>(0.51989761564832704), 10 * tolfeweps ); // cdf
// Basic sanity-check spot values for all floating-point types..
// (Parameter value, arbitrarily zero, only communicates the floating point type).
test_spots(0.0F); // Test float. OK at decdigits = 0 tolerance = 0.0001 %
test_spots(0.0); // Test double. OK at decdigits 7, tolerance = 1e07 %
#ifndef BOOST_MATH_NO_LONG_DOUBLE_MATH_FUNCTIONS
test_spots(0.0L); // Test long double.
#ifndef BOOST_MATH_NO_REAL_CONCEPT_TESTS
test_spots(boost::math::concepts::real_concept(0.)); // Test real concept.
#endif
#else
std::cout << "<note>The long double tests have been disabled on this platform "
"either because the long double overloads of the usual math functions are "
"not available at all, or because they are too inaccurate for these tests "
"to pass.</note>" << std::endl;
#endif
/* */
} // BOOST_AUTO_TEST_CASE( test_main )
/*
Output:
*/
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